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Identification of miRNA-mediated gene regulatory networks in L-methionine exposure counteracts cocaine-conditioned place preference in mice | |
Wang, Yan1,2; Yang, Lvyu1,2; Zhou, Hansheng3; Zhang, Kunlin1; Zhao, Mei1,2 | |
第一作者 | Yan Wang |
通讯作者邮箱 | [email protected] (mei zhao) |
心理所单位排序 | 1 |
摘要 | Background and Aims: Methionine has been proven to inhibit addictive behaviors of cocaine dependence. This study aimed to identify the potential mechanisms of MET relating to its inhibitory effects on cocaine induced cellular and behavioral changes. Methods: MRNA and miRNA high-throughput sequencing of the prefrontal cortex in a mouse model of cocaine conditioned place preference (CPP) combined with L-methionine was performed. Differentially expressed miRNAs (DE-miRNAs) and differentially expressed genes (DEGs) regulated by cocaine and inhibited by L-methionine were identified. DEGs were mapped to STRING database to construct a protein-protein interaction (PPI) network. Then, the identified DEGs were subjected to the DAVID webserver for functional annotation. Finally, miRNA-mRNA regulatory network and miRNA-mRNA-TF regulatory networks were established to screen key DE-miRNAs and coregulation network in Cytoscape. Results: Sequencing data analysis showed that L-methionine reversely regulated genes and miRNAs affected by cocaine. Pathways associated with drug addiction only enriched in CS-down with MC-up genes targeted by DE-miRNAs including GABAergic synapse, Glutamatergic synapse, Circadian entrainment, Axon guidance and Calcium signaling pathway. Drug addiction associated network was formed of 22 DEGs including calcium channel (Cacna1c, Cacna1e, Cacna1g and Cacng8), ephrin receptor genes (Ephb6 and Epha8) and ryanodine receptor genes (Ryr1 and Ryr2). Calcium channel gene network were identified as a core gene network modulated by L-methionine in response to cocaine dependence. Moreover, it was predicted that Grin1 and Fosb presented in TF-miRNA-mRNA coregulation network with a high degree of interaction as hub genes and interacted calcium channels. Conclusion: These identified key genes, miRNA and coregulation network demonstrated the efficacy of L-methionine in counteracting the effects of cocaine CPP. To a certain degree, it may provide some hints to better understand the underlying mechanism on L-methionine in response to cocaine abuse. |
关键词 | high-throughput sequencing microRNA gene expression addiction regulatory network L-methionine cocaine |
2023-01-19 | |
语种 | 英语 |
DOI | 10.3389/fgene.2022.1076156 |
发表期刊 | FRONTIERS IN GENETICS |
卷号 | 13页码:13 |
期刊论文类型 | 实证研究 |
收录类别 | SCI |
资助项目 | National Natural Science Foundation of China[61401459] ; National Natural Science Foundation of China[91132728] ; National Natural Science Foundation of China[31741062] ; Key Laboratory of Mental Health, Institute of Psychology, Chinese Academy of Sciences |
出版者 | FRONTIERS MEDIA SA |
WOS关键词 | DNA METHYLATION ; CALCIUM-CHANNEL ; EXPRESSION ; PROTEIN ; ADDICTION ; RECEPTOR ; BRAIN |
WOS研究方向 | Genetics & Heredity |
WOS类目 | Genetics & Heredity |
WOS记录号 | WOS:000926078800001 |
WOS分区 | Q1 |
资助机构 | National Natural Science Foundation of China ; Key Laboratory of Mental Health, Institute of Psychology, Chinese Academy of Sciences |
引用统计 | |
文献类型 | 期刊论文 |
条目标识符 | http://ir.psych.ac.cn/handle/311026/44748 |
专题 | 中国科学院心理健康重点实验室 |
通讯作者 | Zhao, Mei |
作者单位 | 1.Inst Psychol, CAS Key Lab Mental Hlth, Beijing, Peoples R China 2.Univ Chinese Acad Sci, Dept psychol, Beijing, Peoples R China 3.Linyi Peoples Hosp, Dept Pharm, Linyi, Shandong, Peoples R China |
第一作者单位 | 中国科学院心理健康重点实验室 |
通讯作者单位 | 中国科学院心理健康重点实验室 |
推荐引用方式 GB/T 7714 | Wang, Yan,Yang, Lvyu,Zhou, Hansheng,et al. Identification of miRNA-mediated gene regulatory networks in L-methionine exposure counteracts cocaine-conditioned place preference in mice[J]. FRONTIERS IN GENETICS,2023,13:13. |
APA | Wang, Yan,Yang, Lvyu,Zhou, Hansheng,Zhang, Kunlin,&Zhao, Mei.(2023).Identification of miRNA-mediated gene regulatory networks in L-methionine exposure counteracts cocaine-conditioned place preference in mice.FRONTIERS IN GENETICS,13,13. |
MLA | Wang, Yan,et al."Identification of miRNA-mediated gene regulatory networks in L-methionine exposure counteracts cocaine-conditioned place preference in mice".FRONTIERS IN GENETICS 13(2023):13. |
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